The hidden tracks
Track 61
Deep beneath the Waldorf Astoria hotel, a few blocks north of the terminal, lies a little-known platform often called Track 61. It was built as part of the rail yard, not as a public platform, and it has a freight elevator large enough to carry a car up toward the hotel. A long-told story holds that President Franklin D. Roosevelt used it to arrive at the Waldorf discreetly, keeping the effects of his polio out of public view. Only one such visit, during a campaign stop in October 1944, is firmly documented, but the platform is real. The old rail car parked nearby is often called FDR's, though it's actually an ordinary baggage car.
M42
Somewhere far below the terminal is a basement room known as M42, which once housed the rotary converters that turned AC power into DC for the trains. It was so important to the railroad, and later to the war effort, that its exact location is famously left off maps and blueprints. It's closed to visitors, but it's a favorite piece of Grand Central lore.
A hole in the heavens
Look closely at the ceiling near the constellation Pisces and you may spot a small round hole. It's a remnant of 1957, when a U.S. Army Redstone rocket was displayed upright in the concourse during the early Space Race, and a cable anchored through the ceiling was needed to steady it.